Solyc04g051540.3.1 (Solyc04g051540.3)


Aliases : Solyc04g051540.3

Description : 27.3.32 RNA.regulation of transcription.WRKY domain transcription factor family member of WRKY Transcription Factor Group II-c WRKY DNA-binding protein 13 (WRKY13)


Gene families : OG_01_0000005 (Gene family) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g051540.3.1
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT2G34830 MEE24, AtWRKY35, WRKY35 WRKY DNA-binding protein 35 0.02 Gene family
AT2G44745 No alias WRKY family transcription factor 0.1 Gene family
AT3G58710 ATWRKY69, WRKY69 WRKY DNA-binding protein 69 0.02 Gene family
AT4G39410 ATWRKY13, WRKY13 WRKY DNA-binding protein 13 0.11 Gene family
GSVIVT01014854001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01018300001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01020864001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
GSVIVT01022067001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01022259001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
GSVIVT01030174001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
GSVIVT01034148001 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
LOC_Os01g09080 Os01g0185900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os04g46060 Os04g0545000 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
LOC_Os04g50920 Os04g0597300 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
LOC_Os07g40570 Os07g0596900 27.3.32 RNA.regulation of transcription.WRKY domain... 0.03 Gene family
Solyc01g089960.3.1 Solyc01g089960.3 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d002794 GRMZM2G123387 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family
Zm00001d003331 GRMZM5G816457 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d026252 GRMZM2G091331 27.3.32 RNA.regulation of transcription.WRKY domain... 0.04 Gene family
Zm00001d030139 GRMZM2G383594 27.3.32 RNA.regulation of transcription.WRKY domain... 0.06 Gene family
Zm00001d032915 GRMZM2G011394 No description available 0.02 Gene family
Zm00001d039584 GRMZM2G151444 27.3.32 RNA.regulation of transcription.WRKY domain... 0.05 Gene family
Zm00001d041958 No alias 27.3.32 RNA.regulation of transcription.WRKY domain... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003657 WRKY_dom 158 214
No external refs found!