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  5. AMTR_s00005p00267370

AMTR_s00005p00267370 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00005.237

Description : Actin-interacting protein 1-2 OS=Arabidopsis thaliana


Gene families : OG_01_0003903 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003903_tree ,
OG_02_0005664 (LandPlants) Phylogenetic Tree(s): OG_02_0005664_tree ,
OG_03_0005955 (SeedPlants) Phylogenetic Tree(s): OG_03_0005955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00005p00267370
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
AT3G18060 No alias transducin family protein / WD-40 repeat family protein 0.04 Archaeplastida
Gb_11299 No alias Actin-interacting protein 1-2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
AT3G18060 No alias transducin family protein / WD-40 repeat family protein 0.03 LandPlants
AT3G18060 No alias transducin family protein / WD-40 repeat family protein 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 138 173
IPR001680 WD40_repeat 184 213
IPR001680 WD40_repeat 488 521
IPR001680 WD40_repeat 573 606
IPR001680 WD40_repeat 535 563
IPR001680 WD40_repeat 231 262
IPR001680 WD40_repeat 319 352
IPR001680 WD40_repeat 52 84
IPR011659 PD40 109 125
No external refs found!