Solyc04g049770.3.1 (Solyc04g049770.3)

Aliases : Solyc04g049770.3

Description : 29.2.99 protein.synthesis.misc bindingRNA binding

Gene families : OG_01_0002987 (Gene family) Phylogenetic Tree(s): OG0002987_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc04g049770.3.1
Cluster	HCCA cluster: Cluster_217

Target	Alias	Description	ECC score	Gene Family Method
AT2G39260	No alias	binding;RNA binding	0.09	Gene family
Cpa\|evm.model.tig00022080.18	No alias	29.2.99 protein.synthesis.misc bindingRNA binding	0.04	Gene family
Cre17.g729250	No alias	29.2.99 protein.synthesis.misc bindingRNA binding	0.01	Gene family
GSVIVT01016353001	No alias	29.2.99 protein.synthesis.misc bindingRNA binding	0.1	Gene family
LOC_Os02g42040	Os02g0631500,...	29.2.99 protein.synthesis.misc bindingRNA binding	0.05	Gene family
Zm00001d017303	GRMZM2G042173	29.2.99 protein.synthesis.misc bindingRNA binding	0.06	Gene family
Zm00001d051183	GRMZM2G418604	29.2.99 protein.synthesis.misc bindingRNA binding	0.07	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007193	Upf2/Nmd2_C	1018	1152
IPR003890	MIF4G-like_typ-3	487	671
IPR003890	MIF4G-like_typ-3	689	898

External Links

No external refs found!