Solyc04g049770.3.1 (Solyc04g049770.3)


Aliases : Solyc04g049770.3

Description : 29.2.99 protein.synthesis.misc bindingRNA binding


Gene families : OG_01_0002987 (Gene family) Phylogenetic Tree(s): OG0002987_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g049770.3.1
Cluster HCCA cluster: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
AT2G39260 No alias binding;RNA binding 0.09 Gene family
Cpa|evm.model.tig00022080.18 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.04 Gene family
Cre17.g729250 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.01 Gene family
GSVIVT01016353001 No alias 29.2.99 protein.synthesis.misc bindingRNA binding 0.1 Gene family
LOC_Os02g42040 Os02g0631500,... 29.2.99 protein.synthesis.misc bindingRNA binding 0.05 Gene family
Zm00001d017303 GRMZM2G042173 29.2.99 protein.synthesis.misc bindingRNA binding 0.06 Gene family
Zm00001d051183 GRMZM2G418604 29.2.99 protein.synthesis.misc bindingRNA binding 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007193 Upf2/Nmd2_C 1018 1152
IPR003890 MIF4G-like_typ-3 487 671
IPR003890 MIF4G-like_typ-3 689 898
No external refs found!