Cpa|evm.model.tig00021435.54


Description : No description available


Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00021435.54
Cluster HCCA cluster: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
AT1G03540 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.01 Gene family
AT1G18485 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 Gene family
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Gene family
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01010031001 No alias No description available 0.02 Gene family
GSVIVT01015233001 No alias No description available 0.02 Gene family
GSVIVT01017365001 No alias No description available 0.01 Gene family
GSVIVT01037258001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os01g60250 Os01g0818200 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
LOC_Os04g35650 Os04g0436800 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
LOC_Os07g39090 Os07g0578800,... 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.05 Gene family
LOC_Os12g30620 Os12g0490100 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_140591g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
MA_184088g0010 No alias No description available 0.02 Gene family
MA_81514g0010 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo101 PACid_15417675 No description available 0.01 Gene family
Smo171135 PACid_15406565 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.02 Gene family
Smo84657 PACid_15418630 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo89588 PACid_15410271 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Smo92231 PACid_15416878 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Solyc04g064750.2.1 Solyc04g064750.2 No description available 0.02 Gene family
Zm00001d025870 GRMZM5G827485 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family
Zm00001d050938 GRMZM2G163396 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 318 346
No external refs found!