Solyc04g039950.3.1 (Solyc04g039950.3)


Aliases : Solyc04g039950.3

Description : 35.2 not assigned.unknown Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation. GRAND CENTRAL (GCT)


Gene families : OG_01_0002384 (Gene family) Phylogenetic Tree(s): OG0002384_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g039950.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G55325 GCT RNA polymerase II transcription mediators 0.17 Gene family
Cre02.g080300 No alias No description available 0.02 Gene family
GSVIVT01025465001 No alias 35.2 not assigned.unknown Encodes the Arabidopsis... 0.07 Gene family
LOC_Os05g37500 Os05g0447500,... 35.2 not assigned.unknown Encodes the Arabidopsis... 0.11 Gene family
MA_577306g0010 No alias 35.2 not assigned.unknown Encodes the Arabidopsis... 0.03 Gene family
MA_84527g0010 No alias 35.2 not assigned.unknown Encodes the Arabidopsis... 0.09 Gene family
Smo447924 PACid_15406807 35.2 not assigned.unknown Encodes the Arabidopsis... 0.08 Gene family
Zm00001d045603 GRMZM2G053588,... 35.2 not assigned.unknown Encodes the Arabidopsis... 0.15 Gene family

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA InterProScan
BP GO:0006357 regulation of transcription by RNA polymerase II IEA InterProScan
CC GO:0016592 mediator complex IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR009401 Med13_C 1576 1943
IPR021643 Mediator_Med13_N_met/fun 2 251
No external refs found!