Solyc04g025870.3.1 (Solyc04g025870.3)


Aliases : Solyc04g025870.3

Description : 31.4 cell.vesicle transport Adaptor protein complex AP-1, gamma subunit


Gene families : OG_01_0002895 (Gene family) Phylogenetic Tree(s): OG0002895_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g025870.3.1
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT1G23900 GAMMA-ADAPTIN 1,... gamma-adaptin 1 0.05 Gene family
AT1G60070 No alias Adaptor protein complex AP-1, gamma subunit 0.05 Gene family
Cpa|evm.model.tig00000217.33 No alias 31.4 cell.vesicle transport Adaptor protein complex... 0.03 Gene family
Cre16.g676650 No alias 31.4 cell.vesicle transport Adaptor protein complex... 0.08 Gene family
GSVIVT01020209001 No alias 31.4 cell.vesicle transport Adaptor protein complex... 0.14 Gene family
LOC_Os02g56110 Os02g0805000 31.4 cell.vesicle transport Adaptor protein complex... 0.08 Gene family
LOC_Os06g07090 Os06g0167100 31.4 cell.vesicle transport Adaptor protein complex... 0.19 Gene family
Smo168054 PACid_15419184 31.4 cell.vesicle transport Adaptor protein complex... 0.1 Gene family
Zm00001d036305 GRMZM2G017421 31.4 cell.vesicle transport Adaptor protein complex... 0.2 Gene family
Zm00001d045195 GRMZM2G030144 31.4 cell.vesicle transport Adaptor protein complex... 0.17 Gene family
Zm00001d051998 GRMZM2G054210 31.4 cell.vesicle transport Encodes large subunit of the... 0.14 Gene family

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan
BP GO:0016192 vesicle-mediated transport IEA InterProScan
CC GO:0030117 membrane coat IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 797 910
IPR002553 Clathrin/coatomer_adapt-like_N 27 579
No external refs found!