Solyc04g025300.3.1 (Solyc04g025300.3)


Aliases : Solyc04g025300.3

Description : 27.3.99 RNA.regulation of transcription.unclassified Required for posttranscriptional gene silencing and natural virus resistance.SGS3 is a member of an 'unknown' protein family. Members of this family have predicted coiled coiled domains suggesting oligomerization and a potential zinc finger domain. Involved in the production of trans-acting siRNAs, through direct or indirect stabilization of cleavage fragments of the primary ta-siRNA transcript. Acts before RDR6 in this pathway. SUPPRESSOR OF GENE SILENCING 3 (SGS3)


Gene families : OG_01_0001056 (Gene family) Phylogenetic Tree(s): OG0001056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g025300.3.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000245001 No alias 27.3.99 RNA.regulation of transcription.unclassified... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0031047 gene silencing by RNA IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005380 XS_domain 301 415
IPR005381 Znf-XS_domain 233 270
No external refs found!