Solyc04g012050.3.1 (Solyc04g012050.3)


Aliases : Solyc04g012050.3

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g012050.3.1
Cluster HCCA cluster: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G33710 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G20310 ERF7, ATERF7, ATERF-7 ethylene response factor 7 0.04 Gene family
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.04 Gene family
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G13330 Rap2.6L related to AP2 6l 0.03 Gene family
AT5G21960 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
GSVIVT01013916001 No alias No description available 0.03 Gene family
GSVIVT01013918001 No alias No description available 0.02 Gene family
GSVIVT01013923001 No alias No description available 0.02 Gene family
GSVIVT01013929001 No alias No description available 0.03 Gene family
GSVIVT01013931001 No alias No description available 0.02 Gene family
GSVIVT01013934001 No alias No description available 0.02 Gene family
GSVIVT01013935001 No alias No description available 0.02 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01020584001 No alias No description available 0.02 Gene family
GSVIVT01021146001 No alias No description available 0.03 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01031747001 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
GSVIVT01035502001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os01g64790 Os01g0868000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.02 Gene family
LOC_Os02g34270 No alias No description available 0.04 Gene family
LOC_Os02g42585 Os02g0638650 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.03 Gene family
LOC_Os02g54050 Os02g0781300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
LOC_Os03g08460 Os03g0182800 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.03 Gene family
LOC_Os04g46220 Os04g0546800 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os04g55520 Os04g0648900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
LOC_Os04g57340 Os04g0669200 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os06g10780 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os07g22730 Os07g0410300 No description available 0.02 Gene family
LOC_Os08g35240 Os08g0454000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os09g28440 Os09g0457900 17.5.2 hormone metabolism.ethylene.signal transduction... 0.04 Gene family
LOC_Os10g25170 Os10g0390800 No description available 0.03 Gene family
LOC_Os11g13840 Os11g0242300 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_132427g0010 No alias No description available 0.03 Gene family
MA_214063g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_225124g0010 No alias No description available 0.02 Gene family
MA_24801g0010 No alias No description available 0.02 Gene family
MA_6447416g0010 No alias No description available 0.02 Gene family
MA_8984558g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.07 Gene family
MA_9905g0010 No alias No description available 0.02 Gene family
Smo68470 PACid_15414525 No description available 0.02 Gene family
Smo80895 PACid_15408472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Solyc01g057080.1.1 Solyc01g057080.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Solyc01g067540.1.1 Solyc01g067540.1 No description available 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.03 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.02 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.07 Gene family
Solyc03g005520.1.1 Solyc03g005520.1 No description available 0.05 Gene family
Solyc06g082590.1.1 Solyc06g082590.1 No description available 0.04 Gene family
Solyc08g078180.1.1 Solyc08g078180.1 No description available 0.04 Gene family
Solyc09g089910.1.1 Solyc09g089910.1 No description available 0.02 Gene family
Solyc09g089930.2.1 Solyc09g089930.2 No description available 0.02 Gene family
Solyc11g042560.1.1 Solyc11g042560.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc12g042210.2.1 Solyc12g042210.2 No description available 0.07 Gene family
Zm00001d002079 GRMZM2G174917 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d002762 GRMZM2G055180 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d005309 No alias No description available 0.02 Gene family
Zm00001d005892 GRMZM2G138396 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d008872 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d014113 GRMZM2G024871 17.5.3 hormone... 0.03 Gene family
Zm00001d017366 GRMZM2G139765 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d017462 GRMZM2G466044 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d018158 GRMZM2G103085 No description available 0.04 Gene family
Zm00001d018191 GRMZM2G021369 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d019475 No alias No description available 0.03 Gene family
Zm00001d019734 GRMZM2G123119 No description available 0.03 Gene family
Zm00001d022488 GRMZM2G307119 No description available 0.03 Gene family
Zm00001d024324 GRMZM2G020054 No description available 0.03 Gene family
Zm00001d026191 GRMZM2G080516 No description available 0.03 Gene family
Zm00001d027929 No alias No description available 0.02 Gene family
Zm00001d029679 GRMZM2G477287 No description available 0.04 Gene family
Zm00001d029940 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d032295 GRMZM2G061487 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d034920 GRMZM2G381441 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d036536 GRMZM2G175543 No description available 0.02 Gene family
Zm00001d037165 GRMZM2G084264 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d038216 GRMZM2G481668 No description available 0.03 Gene family
Zm00001d038585 GRMZM2G020150 No description available 0.03 Gene family
Zm00001d039077 GRMZM5G846057 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d042593 GRMZM2G307152 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d042717 GRMZM2G149756 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d044950 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d049058 GRMZM2G073258,... No description available 0.02 Gene family
Zm00001d051239 GRMZM2G300924 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d051340 GRMZM2G319786 No description available 0.02 Gene family
Zm00001d052026 GRMZM2G111415 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d053195 GRMZM2G076896 No description available 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 156 205
No external refs found!