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  5. AMTR_s00122p00108900

AMTR_s00122p00108900 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.48

Description : RNA biosynthesis.transcriptional activation.DBP transcription factor


Gene families : OG_01_0000802 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000802_tree ,
OG_02_0000905 (LandPlants) Phylogenetic Tree(s): OG_02_0000905_tree ,
OG_03_0002937 (SeedPlants) Phylogenetic Tree(s): OG_03_0002937_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00108900
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
AT3G62260 No alias Protein phosphatase 2C family protein 0.03 Archaeplastida
LOC_Os01g19130.1 No alias transcription factor (DBP) 0.03 Archaeplastida
MA_13571g0010 No alias transcription factor (DBP). clade G phosphatase 0.02 Archaeplastida
Solyc01g068000.4.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Solyc06g009390.3.1 No alias transcription factor (DBP) 0.03 Archaeplastida
Zm00001e025432_P001 No alias transcription factor (DBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 89 356
No external refs found!