Solyc04g008610.3.1 (Solyc04g008610.3)


Aliases : Solyc04g008610.3

Description : 27.3.54 RNA.regulation of transcription.Histone acetyltransferases Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation. histone acetyltransferase of the CBP family 1 (HAC1)


Gene families : OG_01_0002875 (Gene family) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g008610.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT1G16710 HAC12 histone acetyltransferase of the CBP family 12 0.22 Gene family
AT1G79000 ATHPCAT2, HAC1,... histone acetyltransferase of the CBP family 1 0.19 Gene family
GSVIVT01029442001 No alias 27.3.54 RNA.regulation of transcription.Histone... 0.14 Gene family
LOC_Os01g14370 Os01g0246100 27.3.54 RNA.regulation of transcription.Histone... 0.07 Gene family
LOC_Os02g04490 Os02g0137450,... 27.3.54 RNA.regulation of transcription.Histone... 0.06 Gene family
MA_13363g0010 No alias 27.3.54 RNA.regulation of transcription.Histone... 0.05 Gene family
MA_8978g0010 No alias 27.3.54 RNA.regulation of transcription.Histone... 0.07 Gene family
Smo180368 PACid_15412552 27.3.54 RNA.regulation of transcription.Histone... 0.07 Gene family
Zm00001d015209 GRMZM2G139977 27.3.54 RNA.regulation of transcription.Histone... 0.18 Gene family

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA InterProScan
MF GO:0004402 histone acetyltransferase activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000433 Znf_ZZ 1474 1513
IPR013178 Histone_AcTrfase_Rtt109/CBP 1075 1290
IPR019787 Znf_PHD-finger 975 1017
IPR000197 Znf_TAZ 1542 1612
IPR000197 Znf_TAZ 593 661
No external refs found!