Pp3c5_26940V3.1


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_01_0006043 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006043_tree ,
OG_02_0007890 (LandPlants) Phylogenetic Tree(s): OG_02_0007890_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_26940V3.1
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G65700 No alias Small nuclear ribonucleoprotein family protein 0.03 Archaeplastida
Cpa|evm.model.tig00020553.52 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.01 Archaeplastida
Cre02.g142850 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.05 Archaeplastida
GSVIVT01024237001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.04 Archaeplastida
LOC_Os05g51650.1 No alias component LSm8 of U6-associated LSm accessory... 0.02 Archaeplastida
MA_10432368g0010 No alias component LSm8 of U6-associated LSm accessory... 0.06 Archaeplastida
Mp4g00350.1 No alias component LSm8 of U6-associated LSm accessory... 0.03 Archaeplastida
Solyc06g073700.3.1 No alias component LSm8 of U6-associated LSm accessory... 0.03 Archaeplastida
Zm00001e032331_P001 No alias component LSm8 of U6-associated LSm accessory... 0.04 Archaeplastida
AMTR_s00002p00272060 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.U6-associated LSm accessory... 0.01 LandPlants
AT1G65700 No alias Small nuclear ribonucleoprotein family protein 0.03 LandPlants
GSVIVT01024237001 No alias RNA processing.RNA splicing.U6-associated LSm accessory... 0.04 LandPlants
LOC_Os05g51650.1 No alias component LSm8 of U6-associated LSm accessory... 0.02 LandPlants
MA_10432368g0010 No alias component LSm8 of U6-associated LSm accessory... 0.06 LandPlants
Mp4g00350.1 No alias component LSm8 of U6-associated LSm accessory... 0.03 LandPlants
Solyc06g073700.3.1 No alias component LSm8 of U6-associated LSm accessory... 0.03 LandPlants
Zm00001e032331_P001 No alias component LSm8 of U6-associated LSm accessory... 0.03 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 7 73
No external refs found!