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  5. AMTR_s00122p00082000

AMTR_s00122p00082000 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.30

Description : Cell cycle.cytokinesis.phragmoplast disassembly.Katanin ATP-dependent microtubule severing complex.catalytic component


Gene families : OG_01_0003594 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003594_tree ,
OG_02_0004912 (LandPlants) Phylogenetic Tree(s): OG_02_0004912_tree ,
OG_03_0007322 (SeedPlants) Phylogenetic Tree(s): OG_03_0007322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00082000
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g49000.1 No alias catalytic component of Katanin ATP-dependent microtubule... 0.05 Archaeplastida
Solyc06g066810.3.1 No alias catalytic component of Katanin ATP-dependent microtubule... 0.02 Archaeplastida
Zm00001e020144_P001 No alias catalytic component of Katanin ATP-dependent microtubule... 0.03 Archaeplastida
GSVIVT01017172001 No alias Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 LandPlants
Gb_41462 No alias catalytic component of Katanin ATP-dependent microtubule... 0.02 LandPlants
LOC_Os01g49000.1 No alias catalytic component of Katanin ATP-dependent microtubule... 0.05 LandPlants
Mp4g20260.1 No alias catalytic component of Katanin ATP-dependent microtubule... 0.01 LandPlants
Solyc06g066810.3.1 No alias catalytic component of Katanin ATP-dependent microtubule... 0.02 LandPlants
Zm00001e020144_P001 No alias catalytic component of Katanin ATP-dependent microtubule... 0.02 LandPlants
AT1G80350 AAA1, LUE1, FTR,... P-loop containing nucleoside triphosphate hydrolases... 0.02 SeedPlants
GSVIVT01017172001 No alias Cell cycle.cytokinesis.phragmoplast disassembly.Katanin... 0.02 SeedPlants
Gb_41462 No alias catalytic component of Katanin ATP-dependent microtubule... 0.02 SeedPlants
LOC_Os01g49000.1 No alias catalytic component of Katanin ATP-dependent microtubule... 0.05 SeedPlants
Solyc06g066810.3.1 No alias catalytic component of Katanin ATP-dependent microtubule... 0.02 SeedPlants
Zm00001e020144_P001 No alias catalytic component of Katanin ATP-dependent microtubule... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015415 Vps4_C 477 522
IPR003959 ATPase_AAA_core 276 413
No external refs found!