Solyc04g007640.3.1 (Solyc04g007640.3)


Aliases : Solyc04g007640.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM repeat superfamily protein


Gene families : OG_01_0001127 (Gene family) Phylogenetic Tree(s): OG0001127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc04g007640.3.1
Cluster HCCA cluster: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT1G23030 No alias ARM repeat superfamily protein 0.04 Gene family
LOC_Os02g49950 Os02g0732200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ARM... 0.05 Gene family
LOC_Os03g16824 Os03g0275900 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d000381 GRMZM2G471733 29.5.11 protein.degradation.ubiquitin ARM repeat... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000225 Armadillo 398 436
IPR000225 Armadillo 480 518
IPR003613 Ubox_domain 268 338
No external refs found!