AMTR_s00122p00021940 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00122.6

Description : Auxin-responsive protein IAA16 OS=Arabidopsis thaliana


Gene families : OG_01_0000129 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000129_tree ,
OG_02_0000051 (LandPlants) Phylogenetic Tree(s): OG_02_0000051_tree ,
OG_03_0039600 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00122p00021940
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g08320.1 No alias Auxin-responsive protein IAA1 OS=Oryza sativa subsp.... 0.01 Archaeplastida
LOC_Os06g22870.1 No alias Auxin-responsive protein IAA21 OS=Oryza sativa subsp.... 0.01 Archaeplastida
Mp6g05000.1 No alias Auxin-responsive protein IAA17 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e036400_P002 No alias Auxin-responsive protein IAA9 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os01g08320.1 No alias Auxin-responsive protein IAA1 OS=Oryza sativa subsp.... 0.01 LandPlants
LOC_Os06g22870.1 No alias Auxin-responsive protein IAA21 OS=Oryza sativa subsp.... 0.01 LandPlants
Mp6g05000.1 No alias Auxin-responsive protein IAA17 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e032955_P001 No alias Auxin-responsive protein IAA24 OS=Oryza sativa subsp.... 0.01 LandPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003311 AUX_IAA 64 252
No external refs found!