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  5. Solyc03g123430.3.1

Solyc03g123430.3.1 (Solyc03g123430.3)


Aliases : Solyc03g123430.3

Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family Integrase-type DNA-binding superfamily protein


Gene families : OG_01_0000034 (Gene family) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g123430.3.1
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT3G20840 PLT1 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT3G54320 WRI1, ATWRI1, ASML1, WRI Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G36920 AP2, FLO2, FL1 Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT4G37750 DRG, CKC, CKC1, ANT Integrase-type DNA-binding superfamily protein 0.06 Gene family
AT5G65510 AIL7 AINTEGUMENTA-like 7 0.07 Gene family
GSVIVT01016764001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.09 Gene family
GSVIVT01025100001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
GSVIVT01027345001 No alias No description available 0.03 Gene family
LOC_Os03g12950 Os03g0232200 33.99 development.unspecified ANT is required for... 0.07 Gene family
LOC_Os03g56050 Os03g0770700 33.99 development.unspecified ANT is required for... 0.07 Gene family
LOC_Os07g03250 Os07g0124700 33.99 development.unspecified ANT is required for... 0.08 Gene family
LOC_Os08g07440 Os08g0171100,... No description available 0.02 Gene family
MA_10434312g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_75070g0010 No alias No description available 0.02 Gene family
MA_8090186g0010 No alias No description available 0.02 Gene family
MA_98095g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.05 Gene family
Smo419668 PACid_15411293 No description available 0.02 Gene family
Solyc11g061750.2.1 Solyc11g061750.2 No description available 0.03 Gene family
Zm00001d002075 GRMZM2G174784 No description available 0.03 Gene family
Zm00001d007840 GRMZM2G146688 33.99 development.unspecified ANT is required for... 0.02 Gene family
Zm00001d018731 GRMZM2G008234 33.99 development.unspecified ANT is required for... 0.08 Gene family
Zm00001d028919 GRMZM2G317160 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d034204 GRMZM2G028151 33.99 development.unspecified ANT is required for... 0.09 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 240 296
IPR001471 AP2/ERF_dom 341 390
No external refs found!