Cpa|evm.model.tig00000169.10


Description : 29.1.3 protein.aa activation.threonine-tRNA ligase Encodes a dual localized threonyl-tRNA synthetase found both in the mitochondrion and the chloroplast. Plants mutated in this gene terminate as embryos in the globular stage. EMBRYO DEFECTIVE 2761 (EMB2761)


Gene families : OG_01_0005950 (Gene family) Phylogenetic Tree(s): OG0005950_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cpa|evm.model.tig00000169.10
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT2G04842 EMB2761 threonyl-tRNA synthetase, putative / threonine--tRNA... 0.03 Gene family
Cre10.g421600 No alias 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.03 Gene family
LOC_Os02g33500 Os02g0538000 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.02 Gene family
Solyc07g048080.3.1 Solyc07g048080.3 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.03 Gene family
Zm00001d021962 No alias 29.1.3 protein.aa activation.threonine-tRNA ligase... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004154 Anticodon-bd 585 682
IPR012947 tRNA_SAD 204 256
IPR002314 aa-tRNA-synt_IIb 368 573
No external refs found!