Pp3c5_16280V3.1


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_01_0004011 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004011_tree ,
OG_02_0004085 (LandPlants) Phylogenetic Tree(s): OG_02_0004085_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_16280V3.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT3G07590 No alias Small nuclear ribonucleoprotein family protein 0.02 Archaeplastida
Cpa|evm.model.tig00000754.23 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.04 Archaeplastida
Cre16.g665400 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.06 Archaeplastida
GSVIVT01014776001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 Archaeplastida
LOC_Os02g37430.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida
Mp1g03900.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.06 Archaeplastida
Solyc06g084310.4.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida
Solyc09g064660.4.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.01 Archaeplastida
Zm00001e007844_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e041053_P001 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 Archaeplastida
AT3G07590 No alias Small nuclear ribonucleoprotein family protein 0.02 LandPlants
GSVIVT01014776001 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 LandPlants
LOC_Os02g37430.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 LandPlants
LOC_Os04g39444.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.01 LandPlants
MA_466601g0010 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.01 LandPlants
MA_96784g0010 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.01 LandPlants
Mp1g03900.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.06 LandPlants
Solyc06g084310.4.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 LandPlants
Solyc09g064660.4.1 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.01 LandPlants
Zm00001e007844_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e041053_P001 No alias component Sm-D1 of U1/U2/U4/U5-associated Sm accessory... 0.03 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 67 131
No external refs found!