Solyc03g118425.1.1 (Solyc03g118425.1)

Aliases : Solyc03g118425.1

Description : 27.3.67 RNA.regulation of transcription.putative transcription regulator Encodes AtNFXL1, a homologue of the putative human transcription repressor NF-X1. Functions as a negative regulator of the trichothecene phytotoxin-induced defense response. NF-X-like 1 (NFXL1)

Gene families : OG_01_0005767 (Gene family) Phylogenetic Tree(s): OG0005767_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g118425.1.1
Cluster HCCA cluster: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g14190 Os06g0252300 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Zm00001d037356 GRMZM2G087787 27.3.67 RNA.regulation of transcription.putative... 0.04 Gene family
Zm00001d044726 GRMZM2G307823,... 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000967 Znf_NFX1 325 342
IPR000967 Znf_NFX1 653 668
IPR000967 Znf_NFX1 447 464
IPR000967 Znf_NFX1 685 703
IPR000967 Znf_NFX1 505 516
IPR000967 Znf_NFX1 543 560
IPR000967 Znf_NFX1 389 406
IPR000967 Znf_NFX1 272 287
No external refs found!