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  5. Pp3c5_11200V3.1

Pp3c5_11200V3.1


Description : fibrillarin 2


Gene families : OG_01_0003455 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003455_tree ,
OG_02_0003421 (LandPlants) Phylogenetic Tree(s): OG_02_0003421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c5_11200V3.1
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00218020 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.07 Archaeplastida
AMTR_s00099p00093470 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 Archaeplastida
AT4G25630 FIB2, ATFIB2 fibrillarin 2 0.16 Archaeplastida
AT5G52470 FIB1, ATFIB1,... fibrillarin 1 0.11 Archaeplastida
Cpa|evm.model.tig00001049.16 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 Archaeplastida
Cre02.g077300 No alias RNA processing.RNA modification.rRNA/tRNA... 0.04 Archaeplastida
GSVIVT01028887001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.16 Archaeplastida
Gb_33899 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.03 Archaeplastida
LOC_Os02g57590.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.09 Archaeplastida
LOC_Os05g08360.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.14 Archaeplastida
MA_124463g0010 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.11 Archaeplastida
Mp2g12880.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.07 Archaeplastida
Pp3c16_12410V3.1 No alias fibrillarin 2 0.02 Archaeplastida
Pp3c6_12420V3.1 No alias fibrillarin 2 0.05 Archaeplastida
Smo171051 No alias RNA processing.RNA modification.rRNA/tRNA... 0.16 Archaeplastida
Solyc03g025270.3.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.26 Archaeplastida
Zm00001e023572_P001 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.11 Archaeplastida
AMTR_s00009p00218020 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.07 LandPlants
AMTR_s00099p00093470 evm_27.TU.AmTr_v1... RNA processing.RNA modification.rRNA/tRNA... 0.02 LandPlants
AT4G25630 FIB2, ATFIB2 fibrillarin 2 0.15 LandPlants
AT5G52470 FIB1, ATFIB1,... fibrillarin 1 0.1 LandPlants
GSVIVT01028887001 No alias RNA processing.RNA modification.rRNA/tRNA... 0.16 LandPlants
Gb_33899 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.03 LandPlants
LOC_Os02g57590.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.09 LandPlants
LOC_Os05g08360.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.13 LandPlants
MA_124463g0010 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.09 LandPlants
Mp2g12880.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.07 LandPlants
Pp3c16_12410V3.1 No alias fibrillarin 2 0.02 LandPlants
Pp3c6_12420V3.1 No alias fibrillarin 2 0.05 LandPlants
Smo171051 No alias RNA processing.RNA modification.rRNA/tRNA... 0.16 LandPlants
Solyc03g025270.3.1 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.24 LandPlants
Zm00001e023572_P001 No alias methyltransferase component Nop1/fibrillarin of snoRNP... 0.1 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!