Solyc03g117130.3.1 (Solyc03g117130.3)


Aliases : Solyc03g117130.3

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g117130.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G01250 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT4G34410 RRTF1 redox responsive transcription factor 1 0.02 Gene family
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.05 Gene family
GSVIVT01002195001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01006277001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01015540001 No alias No description available 0.06 Gene family
GSVIVT01017542001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01027770001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os04g46250 Os04g0547600 No description available 0.02 Gene family
LOC_Os04g52090 Os04g0610400 No description available 0.02 Gene family
LOC_Os05g36100 Os05g0437050,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
LOC_Os06g07030 Os06g0166400 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
MA_10434101g0020 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_180106g0010 No alias No description available 0.02 Gene family
MA_24801g0010 No alias No description available 0.02 Gene family
MA_3073g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.01 Gene family
MA_426919g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_442451g0010 No alias No description available 0.01 Gene family
MA_502153g0010 No alias No description available 0.04 Gene family
MA_5530g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc02g090800.1.1 Solyc02g090800.1 No description available 0.02 Gene family
Solyc03g116610.3.1 Solyc03g116610.3 No description available 0.03 Gene family
Solyc09g066350.1.1 Solyc09g066350.1 No description available 0.03 Gene family
Solyc12g008350.2.1 Solyc12g008350.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.02 Gene family
Zm00001d052167 GRMZM2G173771 No description available 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!