Solyc03g116850.3.1 (Solyc03g116850.3)


Aliases : Solyc03g116850.3

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 8 (CNGC8)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g116850.3.1
Cluster HCCA cluster: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.03 Gene family
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.02 Gene family
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.02 Gene family
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.03 Gene family
AT3G17690 CNGC19, ATCNGC19 cyclic nucleotide gated channel 19 0.03 Gene family
GSVIVT01007785001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
GSVIVT01011487001 No alias No description available 0.02 Gene family
GSVIVT01033170001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os01g57370 Os01g0782800 34.22 transport.cyclic nucleotide or calcium regulated... 0.01 Gene family
LOC_Os03g44440 Os03g0646300 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os12g06570 Os12g0163000,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os12g28260 Os12g0468500 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
MA_10437228g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.01 Gene family
MA_167620g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Smo416791 PACid_15403235 No description available 0.03 Gene family
Solyc02g086990.3.1 Solyc02g086990.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc03g007260.3.1 Solyc03g007260.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d007925 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.04 Gene family
Zm00001d012614 GRMZM2G090528 34.22 transport.cyclic nucleotide or calcium regulated... 0.01 Gene family
Zm00001d013243 GRMZM5G858887 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d013688 GRMZM2G077828 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 102 426
IPR000595 cNMP-bd_dom 523 611
No external refs found!