Solyc03g114930.3.1 (Solyc03g114930.3)


Aliases : Solyc03g114930.3

Description : 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide subunits PsbP-like protein 1 (PPL1)


Gene families : OG_01_0002692 (Gene family) Phylogenetic Tree(s): OG0002692_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g114930.3.1
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT2G39470 PPL2 PsbP-like protein 2 0.12 Gene family
AT3G55330 PPL1 PsbP-like protein 1 0.19 Gene family
Cpa|evm.model.tig00001408.6 No alias No description available 0.04 Gene family
Cre12.g509050 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.05 Gene family
GSVIVT01016616001 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.18 Gene family
GSVIVT01016618001 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.23 Gene family
LOC_Os03g17174 Os03g0279950 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.04 Gene family
LOC_Os08g25900 Os08g0347500 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.07 Gene family
MA_418221g0010 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.09 Gene family
Zm00001d027422 GRMZM2G176840 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.14 Gene family
Zm00001d028670 No alias 1.1.1.2 PS.lightreaction.photosystem II.PSII polypeptide... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
CC GO:0009523 photosystem II IEA InterProScan
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan
BP GO:0015979 photosynthesis IEA InterProScan
CC GO:0019898 extrinsic component of membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002683 PsbP_C 95 243
No external refs found!