Solyc03g114830.3.1 (Solyc03g114830.3)


Aliases : Solyc03g114830.3

Description : 33.99 development.unspecified MADS box gene negatively regulated by APETALA1 AGAMOUS-like 8 (AGL8)


Gene families : OG_01_0000006 (Gene family) Phylogenetic Tree(s): OG0000006_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g114830.3.1
Cluster HCCA cluster: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.02 Gene family
GSVIVT01003861001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.03 Gene family
GSVIVT01010521001 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
LOC_Os03g11614 Os03g0215400 33.99 development.unspecified Encodes a MADS box... 0.03 Gene family
LOC_Os05g11414 Os05g0203800 33.99 development.unspecified Floral homeotic gene... 0.02 Gene family
LOC_Os06g06750 Os06g0162800 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
MA_8378644g0010 No alias 27.3.24 RNA.regulation of transcription.MADS box... 0.02 Gene family
Solyc10g017630.2.1 Solyc10g017630.2 No description available 0.02 Gene family
Zm00001d018142 GRMZM2G046885 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family
Zm00001d044899 GRMZM5G814279 No description available 0.03 Gene family
Zm00001d052180 GRMZM2G370777 33.99 development.unspecified Encodes a nuclear protein... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
IPR002487 TF_Kbox 90 172
No external refs found!