Pp3c4_23770V3.1


Description : Rhamnogalacturonate lyase family protein


Gene families : OG_01_0000794 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000794_tree ,
OG_02_0000615 (LandPlants) Phylogenetic Tree(s): OG_02_0000615_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_23770V3.1
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00046p00191970 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G09880 No alias Rhamnogalacturonate lyase family protein 0.02 Archaeplastida
AT2G22620 No alias Rhamnogalacturonate lyase family protein 0.02 Archaeplastida
GSVIVT01006298001 No alias No description available 0.03 Archaeplastida
GSVIVT01006302001 No alias No description available 0.04 Archaeplastida
GSVIVT01012710001 No alias No description available 0.04 Archaeplastida
Gb_00786 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_00787 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g44020.2 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g44040.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g03790.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10427585g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434775g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_87408g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp2g13570.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g13580.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp3g03160.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g20220.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp5g23380.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp7g03130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp7g11130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp7g11760.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Smo413798 No alias No description available 0.07 Archaeplastida
Solyc04g076640.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc04g076650.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc05g051350.2.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g011280.3.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g011290.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc11g011300.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc11g011310.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g088050.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e013992_P006 No alias no hits & (original description: none) 0.04 Archaeplastida
AMTR_s00046p00193590 evm_27.TU.AmTr_v1... No description available 0.01 LandPlants
AT1G09880 No alias Rhamnogalacturonate lyase family protein 0.02 LandPlants
AT2G22620 No alias Rhamnogalacturonate lyase family protein 0.02 LandPlants
GSVIVT01006302001 No alias No description available 0.03 LandPlants
GSVIVT01012710001 No alias No description available 0.03 LandPlants
Gb_00786 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os08g44020.2 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os12g03790.1 No alias no hits & (original description: none) 0.02 LandPlants
MA_10427585g0010 No alias no hits & (original description: none) 0.01 LandPlants
MA_10434775g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp2g13570.1 No alias no hits & (original description: none) 0.02 LandPlants
Mp2g13580.1 No alias no hits & (original description: none) 0.02 LandPlants
Mp2g13590.1 No alias no hits & (original description: none) 0.01 LandPlants
Mp5g20220.1 No alias no hits & (original description: none) 0.01 LandPlants
Mp7g11130.1 No alias no hits & (original description: none) 0.02 LandPlants
Smo413798 No alias No description available 0.05 LandPlants
Solyc04g076640.3.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc04g076650.2.1 No alias no hits & (original description: none) 0.04 LandPlants
Solyc11g011290.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc11g011310.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc12g088050.2.1 No alias no hits & (original description: none) 0.03 LandPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!