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  5. AMTR_s00119p00105590

AMTR_s00119p00105590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00119.82

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000572 (SeedPlants) Phylogenetic Tree(s): OG_03_0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00119p00105590
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00010p00267100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G57560 AtMYB50, MYB50 myb domain protein 50 0.03 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.02 Archaeplastida
AT5G02320 ATMYB3R5, MYB3R-5 myb domain protein 3r-5 0.02 Archaeplastida
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.02 Archaeplastida
AT5G58850 ATMYB119, MYB119 myb domain protein 119 0.02 Archaeplastida
Cre03.g197100 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01000449001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008402001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_03400 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_15606 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_19348 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_34388 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04820.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g40330.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10432903g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_323706g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_7091g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_7105735g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_95226g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g065100.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g080580.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e026166_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_4704g0010 No alias transcription factor (MYB) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 138 183
IPR001005 SANT/Myb 190 233
No external refs found!