Solyc03g093560.1.1 (Solyc03g093560.1)

Aliases : Solyc03g093560.1

Description : No description available

Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc03g093560.1.1
Cluster	HCCA cluster: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
AT1G04370	ERF14, ATERF14	Ethylene-responsive element binding factor 14	0.03	Gene family
AT1G28370	ATERF11, ERF11	ERF domain protein 11	0.02	Gene family
AT1G50640	ATERF3, ERF3	ethylene responsive element binding factor 3	0.04	Gene family
AT1G74930	ORA47	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT2G33710	No alias	Integrase-type DNA-binding superfamily protein	0.04	Gene family
AT3G15210	ATERF4, RAP2.5,...	ethylene responsive element binding factor 4	0.08	Gene family
AT3G20310	ERF7, ATERF7, ATERF-7	ethylene response factor 7	0.03	Gene family
AT3G23230	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT4G11140	CRF1	cytokinin response factor 1	0.02	Gene family
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.02	Gene family
AT4G34410	RRTF1	redox responsive transcription factor 1	0.04	Gene family
AT4G39780	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G07310	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G07580	No alias	Integrase-type DNA-binding superfamily protein	0.04	Gene family
AT5G13910	LEP	Integrase-type DNA-binding superfamily protein	0.02	Gene family
AT5G18450	No alias	Integrase-type DNA-binding superfamily protein	0.02	Gene family
AT5G47230	ERF5, ATERF-5, ATERF5	ethylene responsive element binding factor 5	0.05	Gene family
AT5G61600	ERF104	ethylene response factor 104	0.03	Gene family
AT5G61890	No alias	Integrase-type DNA-binding superfamily protein	0.03	Gene family
AT5G67190	DEAR2	DREB and EAR motif protein 2	0.03	Gene family
Cre08.g364400	No alias	No description available	0.01	Gene family
GSVIVT01006277001	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
GSVIVT01013914001	No alias	No description available	0.02	Gene family
GSVIVT01013916001	No alias	No description available	0.03	Gene family
GSVIVT01013918001	No alias	No description available	0.02	Gene family
GSVIVT01013929001	No alias	No description available	0.02	Gene family
GSVIVT01013935001	No alias	No description available	0.02	Gene family
LOC_Os01g64790	Os01g0868000	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os01g66270	Os01g0885900	No description available	0.02	Gene family
LOC_Os02g06330	No alias	No description available	0.02	Gene family
LOC_Os02g43790	Os02g0654700	No description available	0.03	Gene family
LOC_Os03g08470	Os03g0183000	No description available	0.02	Gene family
LOC_Os04g52090	Os04g0610400	No description available	0.05	Gene family
LOC_Os04g55520	Os04g0648900	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os04g57340	Os04g0669200	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
LOC_Os05g25260	Os05g0316800	No description available	0.03	Gene family
LOC_Os05g41780	Os05g0497300	17.5.2 hormone metabolism.ethylene.signal transduction...	0.05	Gene family
LOC_Os06g07030	Os06g0166400	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os06g10780	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
LOC_Os08g35240	Os08g0454000	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
LOC_Os09g11480	Os09g0287000	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
MA_104230g0010	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
MA_162045g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
MA_168025g0010	No alias	No description available	0.03	Gene family
MA_203191g0010	No alias	No description available	0.04	Gene family
MA_2446g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.05	Gene family
MA_3073g0010	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
MA_3405g0010	No alias	No description available	0.05	Gene family
MA_4032g0010	No alias	No description available	0.07	Gene family
MA_446533g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.04	Gene family
MA_6447416g0010	No alias	No description available	0.02	Gene family
MA_8384767g0010	No alias	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
MA_96512g0020	No alias	No description available	0.03	Gene family
Smo68470	PACid_15414525	No description available	0.02	Gene family
Smo73155	PACid_15404551	No description available	0.03	Gene family
Solyc04g054910.3.1	Solyc04g054910.3	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Solyc04g071770.3.1	Solyc04g071770.3	No description available	0.03	Gene family
Solyc06g063070.3.1	Solyc06g063070.3	No description available	0.02	Gene family
Zm00001d000339	GRMZM2G174347	No description available	0.03	Gene family
Zm00001d001907	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d002364	GRMZM2G068967	No description available	0.03	Gene family
Zm00001d002762	GRMZM2G055180	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
Zm00001d005309	No alias	No description available	0.02	Gene family
Zm00001d010175	GRMZM2G457562	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.04	Gene family
Zm00001d017462	GRMZM2G466044	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d019734	GRMZM2G123119	No description available	0.03	Gene family
Zm00001d020267	GRMZM2G141679	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d023535	GRMZM2G544539	No description available	0.04	Gene family
Zm00001d024324	GRMZM2G020054	No description available	0.03	Gene family
Zm00001d026191	GRMZM2G080516	No description available	0.03	Gene family
Zm00001d026271	GRMZM2G438202	No description available	0.04	Gene family
Zm00001d026447	GRMZM2G421033	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d026563	No alias	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d027929	No alias	No description available	0.04	Gene family
Zm00001d029679	GRMZM2G477287	No description available	0.03	Gene family
Zm00001d031796	GRMZM2G369472	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
Zm00001d032295	GRMZM2G061487	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Zm00001d036251	GRMZM2G328197	No description available	0.05	Gene family
Zm00001d037941	GRMZM2G085964	No description available	0.03	Gene family
Zm00001d038216	GRMZM2G481668	No description available	0.03	Gene family
Zm00001d038585	GRMZM2G020150	No description available	0.03	Gene family
Zm00001d039077	GRMZM5G846057	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d042593	GRMZM2G307152	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.03	Gene family
Zm00001d042717	GRMZM2G149756	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.04	Gene family
Zm00001d043205	GRMZM2G310368	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d046292	GRMZM2G073047	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.05	Gene family
Zm00001d049058	GRMZM2G073258,...	No description available	0.02	Gene family
Zm00001d049364	GRMZM2G089995	17.5.2 hormone metabolism.ethylene.signal transduction...	0.03	Gene family
Zm00001d051239	GRMZM2G300924	27.3.3 RNA.regulation of transcription.AP2/EREBP,...	0.02	Gene family
Zm00001d052026	GRMZM2G111415	17.5.2 hormone metabolism.ethylene.signal transduction...	0.02	Gene family
Zm00001d052167	GRMZM2G173771	No description available	0.02	Gene family
Zm00001d053859	GRMZM2G052720	No description available	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	104	154

External Links

No external refs found!

Solyc03g093560.1.1 (Solyc03g093560.1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation