Solyc03g083530.3.1 (Solyc03g083530.3)

Aliases : Solyc03g083530.3

Description : protein.synthesis.ribosomal protein.eukaryotic.40S subunit.S13 Encodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development ribosomal protein S13A (RPS13A)

Gene families : OG_01_0002050 (Gene family) Phylogenetic Tree(s): OG0002050_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g083530.3.1
Cluster HCCA cluster: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT3G60770 No alias Ribosomal protein S13/S15 0.24 Gene family
AT4G00100 ATRPS13A, RPS13,... ribosomal protein S13A 0.23 Gene family
Cpa|evm.model.tig00000489.15 No alias protein.synthesis.ribosomal... 0.07 Gene family
Cre07.g331900 No alias protein.synthesis.ribosomal... 0.25 Gene family
GSVIVT01018537001 No alias protein.synthesis.ribosomal... 0.09 Gene family
GSVIVT01027637001 No alias protein.synthesis.ribosomal... 0.16 Gene family
LOC_Os07g38540 Os07g0572900 protein.synthesis.ribosomal... 0.1 Gene family
LOC_Os08g02400 Os08g0117200 protein.synthesis.ribosomal... 0.14 Gene family
LOC_Os08g02410 Os08g0117300 protein.synthesis.ribosomal... 0.17 Gene family
MA_141232g0010 No alias protein.synthesis.ribosomal... 0.07 Gene family
Smo440805 PACid_15407822 No description available 0.09 Gene family
Zm00001d035094 GRMZM5G852185 protein.synthesis.ribosomal... 0.21 Gene family
Zm00001d049668 GRMZM2G112050 protein.synthesis.ribosomal... 0.2 Gene family

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan
CC GO:0005622 intracellular IEA InterProScan
CC GO:0005840 ribosome IEA InterProScan
BP GO:0006412 translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012606 Ribosomal_S13/S15_N 1 60
IPR000589 Ribosomal_S15 74 145
No external refs found!