Solyc03g083280.3.1 (Solyc03g083280.3)


Aliases : Solyc03g083280.3

Description : 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein embryo defective 1796 (emb1796)


Gene families : OG_01_0002862 (Gene family) Phylogenetic Tree(s): OG0002862_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g083280.3.1
Cluster HCCA cluster: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023159001 No alias 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d032900 GRMZM2G164018 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d044388 GRMZM2G074599 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 389 437
IPR002885 Pentatricopeptide_repeat 208 252
IPR002885 Pentatricopeptide_repeat 317 344
IPR002885 Pentatricopeptide_repeat 358 387
IPR002885 Pentatricopeptide_repeat 497 524
IPR002885 Pentatricopeptide_repeat 280 304
IPR002885 Pentatricopeptide_repeat 464 489
No external refs found!