Solyc03g082840.3.1 (Solyc03g082840.3)


Aliases : Solyc03g082840.3

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Zinc finger transcription factor of the Dof family involved in the control of seed germination. dof affecting germination 1 (DAG1)


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g082840.3.1
Cluster HCCA cluster: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT1G28310 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.03 Gene family
AT3G55370 OBP3 OBF-binding protein 3 0.03 Gene family
Cre12.g521150 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01016538001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01021086001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01038591001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.07 Gene family
LOC_Os03g55610 Os03g0764900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d017788 GRMZM2G140694 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d034163 GRMZM2G108865 16.5.1.2.3 secondary... 0.03 Gene family
Zm00001d041549 GRMZM2G176063 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 33 89
No external refs found!