Solyc03g063560.3.1 (Solyc03g063560.3)


Aliases : Solyc03g063560.3

Description : 12.2.1.1 N-metabolism.ammonia metabolism.glutamate synthase.ferredoxin dependent Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression in leaves is induced by light and sucrose. Proposed to be involved in photorespiration and nitrogen assimilation. glutamate synthase 1 (GLU1)


Gene families : OG_01_0001234 (Gene family) Phylogenetic Tree(s): OG0001234_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g063560.3.1
Cluster HCCA cluster: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AT5G04140 GLU1, FD-GOGAT,... glutamate synthase 1 0.11 Gene family
Cre12.g514050 No alias 12.2.1.1 N-metabolism.ammonia metabolism.glutamate... 0.02 Gene family
Cre13.g592200 No alias 12.2.1.2 N-metabolism.ammonia metabolism.glutamate... 0.02 Gene family
GSVIVT01033621001 No alias 12.2.1.1 N-metabolism.ammonia metabolism.glutamate... 0.19 Gene family
LOC_Os07g46460 Os07g0658400 12.2.1.1 N-metabolism.ammonia metabolism.glutamate... 0.11 Gene family
MA_185611g0010 No alias 12.2.1.1 N-metabolism.ammonia metabolism.glutamate... 0.03 Gene family
Smo155359 PACid_15405448 12.2.1.1 N-metabolism.ammonia metabolism.glutamate... 0.1 Gene family
Zm00001d022388 GRMZM2G036609 12.2.1.1 N-metabolism.ammonia metabolism.glutamate... 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006537 glutamate biosynthetic process IEA InterProScan
MF GO:0015930 glutamate synthase activity IEA InterProScan
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002489 Glu_synth_asu_C 1365 1546
IPR017932 GATase_2_dom 99 521
IPR006982 Glu_synth_centr_N 547 840
IPR002932 Glu_synthdom 900 1283
No external refs found!