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  5. Pp3c3_8460V3.1

Pp3c3_8460V3.1


Description : ROOT HAIR DEFECTIVE 6-LIKE 2


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_8460V3.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.03 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.02 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
LOC_Os05g04740.2 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os12g40730.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_10113879g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp5g18910.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 Archaeplastida
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.01 LandPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.02 LandPlants
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT5G61270 PIF7 phytochrome-interacting factor7 0.01 LandPlants
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.01 LandPlants
MA_83500g0010 No alias transcription factor (bHLH) 0.01 LandPlants
Mp5g18910.1 No alias transcription factor (bHLH) 0.01 LandPlants
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 LandPlants
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 LandPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.01 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.01 LandPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 477 517
No external refs found!