Solyc03g033660.3.1 (Solyc03g033660.3)


Aliases : Solyc03g033660.3

Description : 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. GATA transcription factor 5 (GATA5)


Gene families : OG_01_0000059 (Gene family) Phylogenetic Tree(s): OG0000059_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g033660.3.1
Cluster HCCA cluster: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT2G18380 GATA20 GATA transcription factor 20 0.03 Gene family
AT3G20750 GATA29 GATA transcription factor 29 0.03 Gene family
AT3G60530 GATA4 GATA transcription factor 4 0.03 Gene family
Cpa|evm.model.tig00001094.21 No alias No description available 0.02 Gene family
GSVIVT01018951001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.08 Gene family
GSVIVT01033385001 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os01g47360 Os01g0662800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
LOC_Os02g12790 Os02g0220400 No description available 0.02 Gene family
LOC_Os02g56250 Os02g0806300,... 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.04 Gene family
LOC_Os05g50270 Os05g0578900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os10g32070 Os10g0458800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
LOC_Os12g07120 Os12g0168800 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
LOC_Os12g42970 Os12g0624900 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_10434815g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_18616g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.02 Gene family
MA_92522g0010 No alias 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Smo69510 PACid_15417968 No description available 0.02 Gene family
Zm00001d002811 GRMZM2G404973 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d009193 GRMZM2G104390 No description available 0.02 Gene family
Zm00001d009668 GRMZM2G397616 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.1 Gene family
Zm00001d017409 GRMZM2G140669 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.05 Gene family
Zm00001d029896 GRMZM2G113098 27.3.9 RNA.regulation of transcription.C2C2(Zn) GATA... 0.03 Gene family
Zm00001d034751 GRMZM2G114775 No description available 0.02 Gene family
Zm00001d039113 GRMZM2G325850 No description available 0.07 Gene family
Zm00001d043969 GRMZM2G123909 No description available 0.03 Gene family

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0043565 sequence-specific DNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000679 Znf_GATA 199 233
No external refs found!