Solyc03g033330.3.1 (Solyc03g033330.3)


Aliases : Solyc03g033330.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g033330.3.1
Cluster HCCA cluster: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G22500 No alias RING/U-box superfamily protein 0.05 Gene family
AT1G35330 No alias RING/U-box superfamily protein 0.02 Gene family
AT1G53820 No alias RING/U-box superfamily protein 0.04 Gene family
AT2G18670 No alias RING/U-box superfamily protein 0.02 Gene family
AT2G37580 No alias RING/U-box superfamily protein 0.02 Gene family
AT3G14320 No alias Zinc finger, C3HC4 type (RING finger) family protein 0.04 Gene family
AT3G62690 ATL5 AtL5 0.02 Gene family
AT4G09100 No alias RING/U-box superfamily protein 0.02 Gene family
AT4G30370 No alias RING/U-box superfamily protein 0.07 Gene family
AT5G17600 No alias RING/U-box superfamily protein 0.05 Gene family
GSVIVT01018343001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
GSVIVT01022306001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
LOC_Os01g20910 Os01g0311100 No description available 0.01 Gene family
LOC_Os02g08200 Os02g0178600 No description available 0.02 Gene family
LOC_Os02g15110 Os02g0249200 No description available 0.01 Gene family
LOC_Os02g36330 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os04g49550 Os04g0585000 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os06g34400 Os06g0534900,... No description available 0.01 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.01 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.02 Gene family
LOC_Os06g34620 Os06g0537300 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os08g37760 Os08g0484200 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.11 Gene family
LOC_Os09g36500 Os09g0535500 No description available 0.02 Gene family
LOC_Os09g37050 Os09g0542600 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os10g39450 Os10g0540000 No description available 0.03 Gene family
MA_10426834g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_111727g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_41514g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_69343g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
MA_9521306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Smo137213 PACid_15418424 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Smo423895 PACid_15402451 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc01g006910.3.1 Solyc01g006910.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Solyc01g100100.3.1 Solyc01g100100.3 No description available 0.03 Gene family
Solyc01g109200.3.1 Solyc01g109200.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Solyc03g032060.1.1 Solyc03g032060.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.07 Gene family
Solyc11g066510.2.1 Solyc11g066510.2 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d016104 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d029763 GRMZM2G083382 No description available 0.01 Gene family
Zm00001d034369 GRMZM2G135011 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d037019 GRMZM2G026562 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING ATL43 0.01 Gene family
Zm00001d037943 GRMZM2G340444 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Zm00001d046145 GRMZM2G480106 No description available 0.07 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025693 Gly-zipper_OmpA-like_dom 55 91
IPR001841 Znf_RING 195 238
No external refs found!