Solyc03g019940.3.1 (Solyc03g019940.3)


Aliases : Solyc03g019940.3

Description : 29.1.22 protein.aa activation.asparagine-tRNA ligase Asparaginyl-tRNA synthetase protein involved in amino acid activation/protein synthesis. NS1


Gene families : OG_01_0001807 (Gene family) Phylogenetic Tree(s): OG0001807_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g019940.3.1
Cluster HCCA cluster: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT4G17300 ATNS1, NS1, OVA8 Class II aminoacyl-tRNA and biotin synthetases... 0.06 Gene family
Cre03.g193800 No alias 29.1.22 protein.aa activation.asparagine-tRNA ligase... 0.02 Gene family
GSVIVT01004706001 No alias 29.1.22 protein.aa activation.asparagine-tRNA ligase... 0.09 Gene family
LOC_Os07g30200 Os07g0485400 29.1.22 protein.aa activation.asparagine-tRNA ligase... 0.04 Gene family
Zm00001d021507 GRMZM2G455085 29.1.22 protein.aa activation.asparagine-tRNA ligase... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan
MF GO:0005524 ATP binding IEA InterProScan
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004365 NA-bd_OB_tRNA 117 190
IPR004364 aa-tRNA-synt_II 206 461
IPR004364 aa-tRNA-synt_II 519 592
No external refs found!