Solyc03g007260.3.1 (Solyc03g007260.3)


Aliases : Solyc03g007260.3

Description : 34.22 transport.cyclic nucleotide or calcium regulated channels member of Cyclic nucleotide gated channel family cyclic nucleotide gated channel 1 (CNGC1)


Gene families : OG_01_0000081 (Gene family) Phylogenetic Tree(s): OG0000081_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g007260.3.1
Cluster HCCA cluster: Cluster_129

Target Alias Description ECC score Gene Family Method Actions
AT1G01340 ATCNGC10, CNGC10, ACBK1 cyclic nucleotide gated channel 10 0.04 Gene family
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.04 Gene family
AT2G28260 CNGC15, ATCNGC15 cyclic nucleotide-gated channel 15 0.03 Gene family
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.06 Gene family
AT3G17700 ATCNGC20, CNGC20, CNBT1 cyclic nucleotide-binding transporter 1 0.04 Gene family
AT4G01010 ATCNGC13, CNGC13 cyclic nucleotide-gated channel 13 0.04 Gene family
GSVIVT01015970001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
GSVIVT01027087001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
GSVIVT01028711001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
GSVIVT01029404001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.06 Gene family
GSVIVT01029407001 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.05 Gene family
LOC_Os02g15580 Os02g0255000 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
LOC_Os06g10580 Os06g0207700 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
LOC_Os09g38580 Os09g0558300 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
MA_167620g0010 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc03g116850.3.1 Solyc03g116850.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Solyc06g051920.3.1 Solyc06g051920.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Solyc07g005590.3.1 Solyc07g005590.3 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d002099 GRMZM2G023037 34.22 transport.cyclic nucleotide or calcium regulated... 0.03 Gene family
Zm00001d007925 No alias 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d021388 GRMZM2G135651 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family
Zm00001d037035 GRMZM2G129375,... 34.22 transport.cyclic nucleotide or calcium regulated... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan
BP GO:0006811 ion transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 89 406
IPR000595 cNMP-bd_dom 499 589
No external refs found!