Solyc03g005860.3.1 (Solyc03g005860.3)


Aliases : Solyc03g005860.3

Description : 34.16 transport.ABC transporters and multidrug resistance systems P-glycoprotein 11 (PGP11)


Gene families : OG_01_0000036 (Gene family) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g005860.3.1
Cluster HCCA cluster: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT1G27940 PGP13 P-glycoprotein 13 0.03 Gene family
AT1G28010 ABCB14, ATABCB14, PGP14 P-glycoprotein 14 0.03 Gene family
AT3G28380 PGP17 P-glycoprotein 17 0.03 Gene family
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.03 Gene family
AT4G25960 PGP2 P-glycoprotein 2 0.05 Gene family
GSVIVT01000580001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01013125001 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
GSVIVT01015306001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01016706001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
GSVIVT01032578001 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g50160 Os01g0696600 34.16 transport.ABC transporters and multidrug... 0.01 Gene family
LOC_Os02g46680 Os02g0693700 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_10432922g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
MA_111099g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_126766g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
MA_18863g0010 No alias No description available 0.03 Gene family
MA_3437g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_6870g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_79399g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_8590327g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_934204g0010 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Smo176522 PACid_15401958 No description available 0.02 Gene family
Smo230688 PACid_15415534 No description available 0.02 Gene family
Smo92485 PACid_15418498 No description available 0.02 Gene family
Solyc02g087410.3.1 Solyc02g087410.3 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc05g013890.2.1 Solyc05g013890.2 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Solyc06g009280.2.1 Solyc06g009280.2 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Solyc08g076720.3.1 Solyc08g076720.3 34.16 transport.ABC transporters and multidrug... 0.04 Gene family
Solyc11g067310.2.1 Solyc11g067310.2 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
Zm00001d004442 GRMZM2G167658 No description available 0.02 Gene family
Zm00001d025590 GRMZM2G125424 No description available 0.02 Gene family
Zm00001d051514 GRMZM2G004748 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Zm00001d053706 GRMZM2G146034 34.16 transport.ABC transporters and multidrug... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0016021 integral component of membrane IEA InterProScan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 368 515
IPR003439 ABC_transporter-like 1104 1253
IPR011527 ABC1_TM_dom 694 1033
IPR011527 ABC1_TM_dom 26 297
No external refs found!