Cpa|evm.model.tig00021357.40

Description : 29.5 protein.degradation Encodes 20S proteasome subunit PAB1 (PAB1). proteasome subunit PAB1 (PAB1)

Gene families : OG_01_0003926 (Gene family) Phylogenetic Tree(s): OG0003926_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Cpa\|evm.model.tig00021357.40
Cluster	HCCA cluster: Cluster_31

Target	Alias	Description	ECC score	Gene Family Method
AT1G16470	PAB1	proteasome subunit PAB1	0.05	Gene family
AT1G79210	No alias	N-terminal nucleophile aminohydrolases (Ntn hydrolases)...	0.01	Gene family
Cre08.g373250	No alias	29.5 protein.degradation Encodes 20S proteasome subunit...	0.2	Gene family
GSVIVT01012066001	No alias	No description available	0.05	Gene family
LOC_Os02g42320	Os02g0634900	29.5 protein.degradation Encodes 20S proteasome subunit...	0.07	Gene family
LOC_Os03g26970	Os03g0387100	29.5 protein.degradation Encodes 20S proteasome subunit...	0.07	Gene family
Smo177615	PACid_15405566	No description available	0.03	Gene family
Solyc07g055080.3.1	Solyc07g055080.3	No description available	0.04	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	InterProScan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	InterProScan
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000426	Proteasome_asu_N	5	27
IPR001353	Proteasome_sua/b	83	179

External Links

No external refs found!