Solyc03g005500.1.1 (Solyc03g005500.1)


Aliases : Solyc03g005500.1

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g005500.1.1
Cluster HCCA cluster: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.04 Gene family
AT1G28160 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.03 Gene family
AT2G46310 CRF5 cytokinin response factor 5 0.02 Gene family
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.04 Gene family
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.02 Gene family
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 Gene family
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT5G50080 ERF110 ethylene response factor 110 0.03 Gene family
GSVIVT01001089001 No alias No description available 0.02 Gene family
GSVIVT01013931001 No alias No description available 0.02 Gene family
GSVIVT01015037001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01019519001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01022277001 No alias No description available 0.02 Gene family
GSVIVT01032961001 No alias No description available 0.04 Gene family
GSVIVT01032983001 No alias No description available 0.02 Gene family
GSVIVT01034563001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
GSVIVT01036388001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
GSVIVT01036389001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
LOC_Os01g66270 Os01g0885900 No description available 0.02 Gene family
LOC_Os02g13710 Os02g0231000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g32140 Os02g0521100 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os02g52670 Os02g0764700 No description available 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os04g32620 Os04g0398000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os06g11860 Os06g0222400 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os07g22770 Os07g0410700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g07700 Os08g0173700 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os08g36920 Os08g0474000 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
LOC_Os12g39330 Os12g0582900 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_10031781g0010 No alias No description available 0.03 Gene family
MA_115502g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.01 Gene family
MA_130669g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_15251g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
MA_2407076g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_329325g0010 No alias No description available 0.02 Gene family
MA_411387g0010 No alias No description available 0.02 Gene family
MA_490022g0010 No alias No description available 0.02 Gene family
MA_502153g0010 No alias No description available 0.01 Gene family
Solyc01g108240.3.1 Solyc01g108240.3 No description available 0.02 Gene family
Solyc02g090770.1.1 Solyc02g090770.1 No description available 0.02 Gene family
Solyc03g118190.3.1 Solyc03g118190.3 No description available 0.04 Gene family
Solyc04g072900.1.1 Solyc04g072900.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc05g050790.2.1 Solyc05g050790.2 No description available 0.03 Gene family
Solyc06g054630.2.1 Solyc06g054630.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc06g065820.3.1 Solyc06g065820.3 No description available 0.03 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc06g068360.3.1 Solyc06g068360.3 No description available 0.03 Gene family
Solyc08g008305.1.1 Solyc08g008305.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc10g050960.2.1 Solyc10g050960.2 No description available 0.02 Gene family
Solyc10g050970.1.1 Solyc10g050970.1 No description available 0.03 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d001907 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d002011 GRMZM2G067463 No description available 0.03 Gene family
Zm00001d008968 GRMZM2G044077 No description available 0.02 Gene family
Zm00001d016616 GRMZM2G016434 No description available 0.02 Gene family
Zm00001d017466 GRMZM2G057386 No description available 0.02 Gene family
Zm00001d018288 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d026184 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d026486 GRMZM2G104260 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d026563 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.03 Gene family
Zm00001d031498 GRMZM2G016079 No description available 0.02 Gene family
Zm00001d031501 GRMZM2G033656 No description available 0.02 Gene family
Zm00001d031796 GRMZM2G369472 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d043491 GRMZM2G474326 No description available 0.05 Gene family
Zm00001d044950 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d049889 GRMZM2G156737 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d052229 GRMZM2G029323 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Zm00001d053859 GRMZM2G052720 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 5 57
No external refs found!