Solyc03g005490.3.1 (Solyc03g005490.3)


Aliases : Solyc03g005490.3

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING/U-box superfamily protein


Gene families : OG_01_0000002 (Gene family) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g005490.3.1
Cluster HCCA cluster: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT3G05200 ATL6 RING/U-box superfamily protein 0.03 Gene family
AT4G09110 No alias RING/U-box superfamily protein 0.05 Gene family
AT5G07040 No alias RING/U-box superfamily protein 0.03 Gene family
AT5G43420 No alias RING/U-box superfamily protein 0.02 Gene family
GSVIVT01037651001 No alias 35.1 not assigned.no ontology RING/U-box superfamily protein 0.04 Gene family
LOC_Os02g15060 Os02g0248440 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.09 Gene family
LOC_Os02g15100 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
LOC_Os02g46340 Os02g0688800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
LOC_Os06g09310 Os06g0192800 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os06g16060 Os06g0271600 No description available 0.02 Gene family
LOC_Os06g34530 Os06g0536100 No description available 0.01 Gene family
LOC_Os06g34560 Os06g0536466,... No description available 0.02 Gene family
LOC_Os08g43670 Os08g0550400 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
LOC_Os08g44950 Os08g0563500 No description available 0.02 Gene family
LOC_Os11g47690 Os11g0703200 No description available 0.02 Gene family
MA_10244600g0010 No alias No description available 0.02 Gene family
MA_10436028g0020 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_1115518g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_1143g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
MA_126287g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_129306g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_181940g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_222729g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_2679g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_41514g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
MA_77628g0010 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Smo112690 PACid_15415024 No description available 0.02 Gene family
Smo448587 PACid_15406811 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Smo73386 PACid_15406225 No description available 0.02 Gene family
Solyc00g217960.1.1 Solyc00g217960.1 No description available 0.05 Gene family
Solyc02g083400.3.1 Solyc02g083400.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.04 Gene family
Solyc11g005320.1.1 Solyc11g005320.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Solyc12g087840.1.1 Solyc12g087840.1 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.05 Gene family
Zm00001d003497 GRMZM2G171277 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d016142 GRMZM2G324111 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d017678 GRMZM2G004480 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family
Zm00001d031880 No alias No description available 0.01 Gene family
Zm00001d034369 GRMZM2G135011 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.06 Gene family
Zm00001d038478 GRMZM2G390436 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.02 Gene family
Zm00001d046147 No alias No description available 0.02 Gene family
Zm00001d046151 GRMZM2G121143 No description available 0.02 Gene family
Zm00001d051833 GRMZM5G885045 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.01 Gene family
Zm00001d052268 GRMZM2G080079 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 81 124
No external refs found!