Solyc03g005240.2.1 (Solyc03g005240.2)


Aliases : Solyc03g005240.2

Description : 30.3 signalling.calcium encodes a divergent member of calmodulin, which is an EF-hand family of Ca2+-binding proteins. This gene is expressed in leaves, flowers and siliques. The gene functionally complements yeast calmodulin 1 (CAM1). Also the protein does not form formed a complex with a basic amphiphilic helical peptide in the presence of Ca2+ in vitro. Authors suggest that this gene may represent a Ca2+-binding sensor protein that interacts with a more limited set of target proteins than do more conventional CaM isoforms. calmodulin 8 (CAM8)


Gene families : OG_01_0000164 (Gene family) Phylogenetic Tree(s): OG0000164_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc03g005240.2.1
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01025831001 No alias 30.3 signalling.calcium Encodes a calmodulin isoform.... 0.02 Gene family
LOC_Os03g20370 Os03g0319300 30.3 signalling.calcium EF hand domain protein encodes a... 0.02 Gene family
Solyc11g072240.2.1 Solyc11g072240.2 30.3 signalling.calcium EF hand domain protein encodes a... 0.04 Gene family
Zm00001d010650 GRMZM2G004703 30.3 signalling.calcium EF hand domain protein encodes a... 0.03 Gene family
Zm00001d040323 GRMZM2G067511 30.3 signalling.calcium EF hand domain protein encodes a... 0.02 Gene family
Zm00001d041430 GRMZM2G444621 30.3 signalling.calcium Encodes a calmodulin-like... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 28 77
IPR002048 EF_hand_dom 87 150
No external refs found!