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  5. Aev_g37839

Aev_g37839


Description : not classified & original description: none


Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g37839

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g22670,... 0.03 OrthoFinder output from all 47 species
AMTR_s00044p00153760 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
GSVIVT01002056001 No alias Pentatricopeptide repeat-containing protein At5g64320,... 0.02 OrthoFinder output from all 47 species
Gb_12874 No alias Pentatricopeptide repeat-containing protein At3g61360... 0.03 OrthoFinder output from all 47 species
MA_355286g0010 No alias Pentatricopeptide repeat-containing protein At5g15010,... 0.03 OrthoFinder output from all 47 species
MA_39587g0010 No alias Pentatricopeptide repeat-containing protein At2g13420,... 0.02 OrthoFinder output from all 47 species
MA_455059g0020 No alias Pentatricopeptide repeat-containing protein At3g62470,... 0.03 OrthoFinder output from all 47 species
Mp4g20290.1 No alias Pentatricopeptide repeat-containing protein At3g06920... 0.03 OrthoFinder output from all 47 species
Sam_g17038 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g007267.1.1 Solyc01g007267 Pentatricopeptide repeat-containing protein At3g49730... 0.03 OrthoFinder output from all 47 species
Solyc03g113750.3.1 OTP43, Solyc03g113750 OTP43 mitochondrial RNA splicing factor 0.02 OrthoFinder output from all 47 species
Solyc03g117570.3.1 Solyc03g117570 Pentatricopeptide repeat-containing protein At1g80880,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 213 260
IPR002885 Pentatricopeptide_repeat 318 366
IPR002885 Pentatricopeptide_repeat 142 188
IPR002885 Pentatricopeptide_repeat 278 311
IPR002885 Pentatricopeptide_repeat 76 104
IPR002885 Pentatricopeptide_repeat 112 137
No external refs found!