Solyc02g092310.3.1 (Solyc02g092310.3)

Aliases : Solyc02g092310.3

Description : 35.1.5 not ontology.pentatricopeptide (PPR) repeat-containing protein Encodes a pentratricopeptide repeat containing protein that is targeted to the chloroplast. Mutants have pale young leave and reduced accumulation of plastid encoded transcripts suggesting a role for DG1 in regulation of plastid gene expression. DELAYED GREENING 1 (DG1)

Gene families : OG_01_0008742 (Gene family) Phylogenetic Tree(s): OG0008742_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g092310.3.1
Cluster HCCA cluster: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT5G67570 EMB1408, DG1, EMB246 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Gene family
GSVIVT01004304001 No alias 35.1.5 not ontology.pentatricopeptide (PPR)... 0.04 Gene family
LOC_Os05g25060 Os05g0315100 35.1.5 not ontology.pentatricopeptide (PPR)... 0.05 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 333 377
IPR002885 Pentatricopeptide_repeat 409 438
IPR002885 Pentatricopeptide_repeat 254 280
IPR002885 Pentatricopeptide_repeat 516 536
No external refs found!