Aev_g37454 (PUB26)

Aliases : PUB26

Description : U-Box-group-III E3 ubiquitin ligase & original description: none

Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aev_g37454

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00043p00215340	PUB8, B80,...	U-box domain-containing protein 8 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT3G02840	No alias	ARM repeat superfamily protein	0.02	OrthoFinder output from all 47 species
AT3G11840	PUB24	plant U-box 24	0.03	OrthoFinder output from all 47 species
AT5G64660	CMPG2, ATCMPG2	CYS, MET, PRO, and GLY protein 2	0.02	OrthoFinder output from all 47 species
Als_g10929	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g35657	PUB25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g20185	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0084.g038964	PUB25	U-Box-group-III E3 ubiquitin ligase & original...	0.02	OrthoFinder output from all 47 species
Cba_g78214	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.07G004600.1	PUB26, Ceric.07G004600	E3 ubiquitin ligase & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.08G030400.1	PUB26, Ceric.08G030400	U-Box-group-III E3 ubiquitin ligase & original...	0.03	OrthoFinder output from all 47 species
Dcu_g04516	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07421	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g01464	PUB26	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Gb_29938	CMPG2, ATCMPG2	E3 ubiquitin ligase (PUB)	0.02	OrthoFinder output from all 47 species
LOC_Os03g13010.1	LOC_Os03g13010	U-box domain-containing protein 75 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
LOC_Os04g34140.1	PUB29, ATPUB29,...	E3 ubiquitin ligase (PUB)	0.03	OrthoFinder output from all 47 species
LOC_Os04g49970.1	PUB23, LOC_Os04g49970	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
LOC_Os06g13870.1	LOC_Os06g13870	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Len_g01213	PUB25	U-Box-group-III E3 ubiquitin ligase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10425865g0010	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_10430196g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_1663g0020	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_17715g0010	CMPG1, ATCMPG1	U-box domain-containing protein 20 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_779502g0010	PUB23	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_84154g0010	PUB25	U-box domain-containing protein 25 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_95662g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g39476	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g06628	PUB25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g12004	PUB26	U-Box-group-III E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19522	PUB26	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c22_7680V3.1	Pp3c22_7680	CYS, MET, PRO, and GLY protein 2	0.02	OrthoFinder output from all 47 species
Ppi_g04485	PUB26	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002717	PUB26	not classified & original description: CDS=1-1404	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015794	PUB26	U-Box-group-III E3 ubiquitin ligase & original...	0.02	OrthoFinder output from all 47 species
Smo403954	PUB25	U-box domain-containing protein 25 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Smo416356	PUB26	U-box domain-containing protein 30 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Smo426053	PUB26	U-box domain-containing protein 26 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Solyc01g007000.4.1	PUB22, Solyc01g007000	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007010.2.1	PUB22, Solyc01g007010	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007020.4.1	PUB23, Solyc01g007020	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g007030.3.1	PUB22, Solyc01g007030	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g007040.4.1	PUB22, Solyc01g007040	E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc01g009320.2.1	PUB23, Solyc01g009320	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Solyc01g107980.3.1	PUB26, Solyc01g107980	U-box domain-containing protein 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc05g056500.1.1	PUB26, Solyc05g056500	U-box domain-containing protein 26 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Solyc11g006030.1.1	Solyc11g006030	U-box domain-containing protein 21 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc11g068920.1.1	PUB23, Solyc11g068920	E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc11g068940.1.1	PUB24, Solyc11g068940	E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Spa_g47017	PUB23	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009987	cellular process	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	111	182

External Links

No external refs found!

Aev_g37454 (PUB26)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation