Solyc02g090220.3.1 (Solyc02g090220.3)


Aliases : Solyc02g090220.3

Description : 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc finger family Arabidopsis Dof protein containing a single 51-amino acid zinc finger DNA-binding domain, which may play an important roles in plant growth and development. OBF binding protein 1 (OBP1)


Gene families : OG_01_0000024 (Gene family) Phylogenetic Tree(s): OG0000024_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g090220.3.1
Cluster HCCA cluster: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.04 Gene family
AT2G28810 No alias Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.04 Gene family
AT2G37590 DOF2.4, ATDOF2.4 DNA binding with one finger 2.4 0.03 Gene family
AT3G45610 No alias Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT3G55370 OBP3 OBF-binding protein 3 0.02 Gene family
AT4G24060 No alias Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT5G60200 TMO6 TARGET OF MONOPTEROS 6 0.04 Gene family
AT5G60850 OBP4 OBF binding protein 4 0.01 Gene family
AT5G62940 HCA2, DOF5.6 Dof-type zinc finger DNA-binding family protein 0.02 Gene family
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.1 Gene family
GSVIVT01005057001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
GSVIVT01007992001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01016538001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
GSVIVT01019619001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
GSVIVT01021085001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
GSVIVT01024986001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
GSVIVT01034189001 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
LOC_Os01g17000 Os01g0277500 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
LOC_Os01g48290 Os01g0673700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os02g49440 Os02g0726300 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os03g07360 Os03g0169600 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os03g55610 Os03g0764900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os04g58190 Os04g0678400 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os05g02150 Os05g0112200 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.06 Gene family
LOC_Os05g36900 Os05g0440000 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os07g32510 Os07g0508700,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os08g38220 Os08g0490100 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
LOC_Os10g35300 Os10g0496000 No description available 0.02 Gene family
LOC_Os12g38200 Os12g0569900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
LOC_Os12g39990 Os12g0590700 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
MA_459791g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_56828g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_74014g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
MA_7537g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
MA_939289g0010 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Smo29617 PACid_15412310 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Smo89924 PACid_15413201 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Solyc01g096120.3.1 Solyc01g096120.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Solyc02g090310.1.1 Solyc02g090310.1 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.01 Gene family
Solyc03g112930.3.1 Solyc03g112930.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.05 Gene family
Solyc06g071480.3.1 Solyc06g071480.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Solyc09g010680.3.1 Solyc09g010680.3 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d005970 GRMZM2G009406 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d006463 GRMZM2G064655 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d013724 GRMZM2G061292 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d014198 No alias 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d017788 GRMZM2G140694 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d020837 GRMZM2G089850 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d021591 GRMZM2G134545,... 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.04 Gene family
Zm00001d030727 GRMZM2G123900 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.11 Gene family
Zm00001d033325 GRMZM2G045678 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family
Zm00001d034163 GRMZM2G108865 16.5.1.2.3 secondary... 0.09 Gene family
Zm00001d035651 GRMZM2G179069 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.03 Gene family
Zm00001d041549 GRMZM2G176063 27.3.8 RNA.regulation of transcription.C2C2(Zn) DOF zinc... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003851 Znf_Dof 22 77
No external refs found!