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  5. Solyc02g089800.3.1

Solyc02g089800.3.1 (Solyc02g089800.3)


Aliases : Solyc02g089800.3

Description : 35.1 not assigned.no ontology Encodes a nuclear coiled-coil protein related to the carrot peripheral nuclear protein NMCP1 that is involved in the determination of plant nuclear structure. LITTLE NUCLEI1 (LINC1)


Gene families : OG_01_0002340 (Gene family) Phylogenetic Tree(s): OG0002340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g089800.3.1
Cluster HCCA cluster: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT1G13220 LINC2 nuclear matrix constituent protein-related 0.04 Gene family
AT1G68790 LINC3 little nuclei3 0.09 Gene family
AT5G65770 LINC4 little nuclei4 0.05 Gene family
GSVIVT01007428001 No alias 35.1 not assigned.no ontology LITTLE NUCLEI4 (LINC4) 0.02 Gene family
GSVIVT01011972001 No alias 35.1 not assigned.no ontology LITTLE NUCLEI3 (LINC3) 0.03 Gene family
GSVIVT01031076001 No alias 35.1 not assigned.no ontology Encodes a nuclear... 0.07 Gene family
LOC_Os01g56140 Os01g0767000 35.1 not assigned.no ontology LITTLE NUCLEI4 (LINC4) 0.02 Gene family
LOC_Os02g48010 Os02g0709900,... 35.1 not assigned.no ontology Encodes a nuclear... 0.08 Gene family
MA_31023g0010 No alias 35.1 not assigned.no ontology LITTLE NUCLEI4 (LINC4) 0.03 Gene family
Zm00001d043335 GRMZM2G320013 35.1 not assigned.no ontology LITTLE NUCLEI4 (LINC4) 0.02 Gene family
Zm00001d051600 GRMZM2G015875 35.1 not assigned.no ontology Encodes a nuclear... 0.12 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!