Solyc02g089790.3.1 (Solyc02g089790.3)

Aliases : Solyc02g089790.3

Description : 27.3.54 RNA.regulation of transcription.Histone acetyltransferases Homologous to CREB-binding protein, a co-activator of transcription with histone acetyl-transferase activity. No single prior lysine acetylation is sufficient to block HAC1 acetylation of the H3 or H4 peptides, suggesting that HAC1, HAC5, and HAC12 can acetylate any of several lysines present in the peptides. HAM2 acetylates histone H4 lysine 5. A plant line expressing an RNAi construct targeted against HAC1 has reduced rates of agrobacterium-mediated root transformation. histone acetyltransferase of the CBP family 1 (HAC1)

Gene families : OG_01_0002875 (Gene family) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g089790.3.1
Cluster HCCA cluster: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g14370 Os01g0246100 27.3.54 RNA.regulation of transcription.Histone... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEA InterProScan
MF GO:0004402 histone acetyltransferase activity IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013178 Histone_AcTrfase_Rtt109/CBP 1010 1208
IPR000197 Znf_TAZ 1384 1455
No external refs found!