Solyc02g088550.3.1 (Solyc02g088550.3)

Aliases : Solyc02g088550.3

Description : 29.5.11 protein.degradation.ubiquitin U-box domain-containing protein

Gene families : OG_01_0003411 (Gene family) Phylogenetic Tree(s): OG0003411_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g088550.3.1
Cluster HCCA cluster: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT5G15400 No alias U-box domain-containing protein 0.04 Gene family
GSVIVT01011484001 No alias 29.5.11 protein.degradation.ubiquitin U-box... 0.08 Gene family
MA_16148g0010 No alias 29.5.11 protein.degradation.ubiquitin U-box... 0.03 Gene family
Smo142432 PACid_15412612 No description available 0.06 Gene family
Zm00001d029561 GRMZM2G030805 29.5.11 protein.degradation.ubiquitin U-box... 0.04 Gene family

Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEA InterProScan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA InterProScan
BP GO:0016567 protein ubiquitination IEA InterProScan
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 948 1019
IPR019474 Ub_conjug_fac_E4_core 263 931
No external refs found!