Pp3c2_6770V3.1


Description : GTP binding Elongation factor Tu family protein


Gene families : OG_01_0000191 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000191_tree ,
OG_02_0000317 (LandPlants) Phylogenetic Tree(s): OG_02_0000317_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_6770V3.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00237190 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.02 Archaeplastida
AMTR_s00066p00072310 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.03 Archaeplastida
AT1G07920 No alias GTP binding Elongation factor Tu family protein 0.05 Archaeplastida
AT1G07930 No alias GTP binding Elongation factor Tu family protein 0.07 Archaeplastida
AT1G07940 No alias GTP binding Elongation factor Tu family protein 0.06 Archaeplastida
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.09 Archaeplastida
Cpa|evm.model.tig00021352.57 No alias Protein biosynthesis.translation elongation.eEF1A... 0.01 Archaeplastida
Cre06.g263450 No alias Elongation factor 1-alpha OS=Glycine max 0.03 Archaeplastida
Cre06.g284750 No alias Protein biosynthesis.translation termination.eRF3... 0.05 Archaeplastida
Cre12.g498600 No alias Elongation factor 1-alpha OS=Glycine max 0.01 Archaeplastida
GSVIVT01008382001 No alias No description available 0.02 Archaeplastida
Gb_17471 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 Archaeplastida
Gb_22919 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 Archaeplastida
LOC_Os03g08010.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.09 Archaeplastida
LOC_Os03g08020.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 Archaeplastida
LOC_Os03g08050.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 Archaeplastida
MA_10428053g0010 No alias Elongation factor 1-alpha OS=Solanum lycopersicum... 0.01 Archaeplastida
MA_651220g0010 No alias Elongation factor 1-alpha OS=Oryza sativa subsp.... 0.04 Archaeplastida
MA_7085077g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.08 Archaeplastida
Smo115313 No alias Protein biosynthesis.translation termination.eRF3... 0.02 Archaeplastida
Smo169717 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 Archaeplastida
Smo171512 No alias Protein biosynthesis.translation elongation.eEF1A... 0.04 Archaeplastida
Smo270693 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 Archaeplastida
Solyc06g005060.3.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 Archaeplastida
Solyc06g009970.3.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 Archaeplastida
Solyc06g069020.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g069097.1.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.01 Archaeplastida
Solyc11g150146.1.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.07 Archaeplastida
Zm00001e026762_P001 No alias aminoacyl-tRNA binding factor (eEF1A) 0.07 Archaeplastida
Zm00001e026763_P003 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 Archaeplastida
Zm00001e030598_P002 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 Archaeplastida
Zm00001e031390_P004 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 Archaeplastida
Zm00001e031391_P002 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 Archaeplastida
Zm00001e031407_P001 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 Archaeplastida
Zm00001e037355_P001 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 Archaeplastida
Zm00001e040640_P002 No alias eRF3 peptide release factor 0.05 Archaeplastida
AMTR_s00012p00237190 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.02 LandPlants
AMTR_s00066p00072310 evm_27.TU.AmTr_v1... Protein biosynthesis.translation elongation.eEF1A... 0.03 LandPlants
AT1G07920 No alias GTP binding Elongation factor Tu family protein 0.05 LandPlants
AT1G07930 No alias GTP binding Elongation factor Tu family protein 0.07 LandPlants
AT1G07940 No alias GTP binding Elongation factor Tu family protein 0.06 LandPlants
AT5G60390 No alias GTP binding Elongation factor Tu family protein 0.09 LandPlants
Gb_17471 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 LandPlants
Gb_22919 No alias aminoacyl-tRNA binding factor (eEF1A) 0.02 LandPlants
LOC_Os03g08010.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.09 LandPlants
LOC_Os03g08020.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 LandPlants
LOC_Os03g08050.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 LandPlants
MA_642627g0010 No alias Elongation factor 1-alpha OS=Triticum aestivum... 0.01 LandPlants
MA_651220g0010 No alias Elongation factor 1-alpha OS=Oryza sativa subsp.... 0.04 LandPlants
MA_7085077g0010 No alias no hits & (original description: none) 0.03 LandPlants
Mp3g23400.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.08 LandPlants
Smo169717 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 LandPlants
Smo171512 No alias Protein biosynthesis.translation elongation.eEF1A... 0.04 LandPlants
Smo270693 No alias Protein biosynthesis.translation elongation.eEF1A... 0.03 LandPlants
Solyc06g005060.3.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 LandPlants
Solyc06g009970.3.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.04 LandPlants
Solyc11g069097.1.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.01 LandPlants
Solyc11g150146.1.1 No alias aminoacyl-tRNA binding factor (eEF1A) 0.07 LandPlants
Zm00001e026762_P001 No alias aminoacyl-tRNA binding factor (eEF1A) 0.07 LandPlants
Zm00001e026763_P003 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 LandPlants
Zm00001e030598_P002 No alias aminoacyl-tRNA binding factor (eEF1A) 0.03 LandPlants
Zm00001e031389_P001 No alias no hits & (original description: none) 0.01 LandPlants
Zm00001e031390_P004 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 LandPlants
Zm00001e031391_P002 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 LandPlants
Zm00001e031407_P001 No alias aminoacyl-tRNA binding factor (eEF1A) 0.06 LandPlants
Zm00001e037355_P001 No alias aminoacyl-tRNA binding factor (eEF1A) 0.05 LandPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004161 EFTu-like_2 248 313
IPR000795 T_Tr_GTP-bd_dom 6 222
IPR004160 Transl_elong_EFTu/EF1A_C 322 429
No external refs found!