Solyc02g087870.3.1 (Solyc02g087870.3)


Aliases : Solyc02g087870.3

Description : No description available


Gene families : OG_01_0000036 (Gene family) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Solyc02g087870.3.1
Cluster HCCA cluster: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT1G02530 PGP12 P-glycoprotein 12 0.02 Gene family
AT3G28860 ABCB19,... ATP binding cassette subfamily B19 0.03 Gene family
Cpa|evm.model.tig00000293.10 No alias No description available 0.01 Gene family
Cpa|evm.model.tig00021434.18 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Cre16.g669525 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os01g74470 Os01g0976100 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
LOC_Os04g38570 Os04g0459000 No description available 0.04 Gene family
MA_10431815g0020 No alias No description available 0.04 Gene family
MA_62683g0010 No alias No description available 0.02 Gene family
Smo229984 PACid_15414667 No description available 0.02 Gene family
Smo230688 PACid_15415534 No description available 0.04 Gene family
Zm00001d025590 GRMZM2G125424 No description available 0.07 Gene family
Zm00001d026426 GRMZM2G085236 No description available 0.02 Gene family
Zm00001d031871 GRMZM2G315375 No description available 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
CC GO:0016021 integral component of membrane IEA InterProScan
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA InterProScan
BP GO:0055085 transmembrane transport IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 1026 1174
IPR003439 ABC_transporter-like 387 529
IPR011527 ABC1_TM_dom 41 312
IPR011527 ABC1_TM_dom 685 956
No external refs found!