Solyc02g087840.3.1 (Solyc02g087840.3)

Aliases : Solyc02g087840.3

Description : No description available

Gene families : OG_01_0000092 (Gene family) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): Solyc02g087840.3.1
Cluster	HCCA cluster: Cluster_170

Target	Alias	Description	ECC score	Gene Family Method
AT1G27045	No alias	Homeobox-leucine zipper protein family	0.04	Gene family
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.02	Gene family
AT3G01220	ATHB20, HB20	homeobox protein 20	0.02	Gene family
AT4G36740	ATHB40, HB40, HB-5	homeobox protein 40	0.03	Gene family
AT5G53980	ATHB52, HB52	homeobox protein 52	0.02	Gene family
GSVIVT01019655001	No alias	No description available	0.03	Gene family
GSVIVT01020033001	No alias	No description available	0.03	Gene family
LOC_Os04g45810	Os04g0541700	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.02	Gene family
Solyc02g067410.2.1	Solyc02g067410.2	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.02	Gene family
Zm00001d002799	GRMZM2G351330	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.04	Gene family
Zm00001d014201	GRMZM5G803812	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.02	Gene family
Zm00001d021268	GRMZM2G041462	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.02	Gene family
Zm00001d025964	GRMZM2G396527	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.03	Gene family
Zm00001d027852	GRMZM2G139963	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.03	Gene family
Zm00001d048227	No alias	27.3.22 RNA.regulation of transcription.HB,Homeobox...	0.03	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	95	148
IPR003106	Leu_zip_homeo	150	190

External Links

No external refs found!

Solyc02g087840.3.1 (Solyc02g087840.3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation